tree to answer question 2 n Arabidopsis arenosa Arabidopsis

tree to answer question 2. n Arabidopsis arenosa Arabidopsis halleri Arabidopsis lyrata Arabidopsis thaliana Capsella rubella Capsella grandiflora Camelina sativa Boechera stricta Boechera holboellii Cardamine hirsuta Rorippa islandica Leavenworthia alabamica Descurainia sophioides Lepidium sativum Biscutella didyma Lunaria annua Brassica oleracea Brassica rapa Brassica napus Cakile maritima Crambe hispanica Sinapis alba Alyssum linifolium Eruca vesicaria Arabis alpina Iberis amara satis tinctoria Sisymbrium irio Caulanthus amplexicaulis Stanleya pinnata Thlaspi arvense utrema salsugineum Schrenkiella parvula Malcolmia maritima Diptychocarpus strictus Euclidium syriacum Aethionema arabicum Ochradenus baccatus Tarenaya hassleriana

Solution

answer--multilocus sequence typing (MST)---sequence types--it analyses the sequences of bacterial sequences which can be used for phylogenetic analysis and phylogenetic tree construction with phylogenetic names and clades and alignment of sequences of various bacterial species and other species for example plants as depicted in the phylogenetic tree above includes arabidopsis ,brassica, arabis,crambe etc.

Further average nucleotide identity(ANI) is calculated for the alignment of different plant species and average amino acid identity (AAI), is also calculated and coding is given for similar amino acid in sequences from different species.

Further ribosomal sequence analysis is also done for various plant species by ribosomal multi sequence alignment (MLST).