compare and contrast between those sequences of mir22 in dif

compare and contrast between those sequences of mir-22 in different species using . The sequences listed below:

>Carolina anole _mirr22

GCGCAGCAGUUCUUCAGCGGCAUCGCUUUACGUCCCUUUUAAGAAGCUAAAGCUGCGCAGUUGAAGAACUGUUGGCC

>fruit bat _mirr22

ACCUGGCUGAGCCGCAGUAGUUCUUCAGUGGCAAGCUUUAUGUCCUGACCCAGCUAAAGCUGCCAGUUGAAGAACUGUUGCCCUCUGCCCCUGGC

>cattle_mir22

GGCUGAGCCGCAGUAGUUCUUCAGUGGCAAGCUUUAUGUCCUGACCCAGCUAAAGCUGCCAGUUGAAGAACUGUUGCCCUCUGCC

>common carp _mirr22

AGUGAAUAUUGGCUGACCUACCGCAGUUCUUCUCUGGCAAACUUUAUGACCCUGUCCUGACGCUAAAGCUGCCAGCUGAAGAACUGUUGUGGUCAGCUCU

>Lemur catta_mir22

GGCUGAGCCGCAGUAGUUCUUCAGUGGCAAGCUUUAUGUCCUGACCCAGCUAAAGCUGCCAGUUGAAGAACUGUUGCCCUCUGCC

>Ophiophagus_mir22

CUACCCGCAGCAGUUCUUCAGUGGCACGCUUUACGUCCCCUCCAGCAACUAAAGCUGCCAGUUGAAGAACUGUUGGCCGUAGC

>lamprey_mir22

CCCUGGCCGCCCCACUGCAGCCCUUCGCUGGCCAGCUUUAGUUCCGGCCGAGGCGAGUAAAGCUGCCAGUUGAAGAGCUAUAGUGGGCGGCCACGC

>Pan paniscus_mirr22

GGCUGAGCCGCAGUAGUUCUUCAGUGGCAAGCUUUAUGUCCUGACCCAGCUAAAGCUGCCAGUUGAAGAACUGUUGCCCUCUGCC

>wild boar_mirr22

GAGCCGCAGUAGUUCUUCAGUGGCAAGCUUUAUGUCCUGACCCAGCUAAAGCUGCCAGUUGAAGAACUGUUGCCCUCUGC

>Tupaia_mir22

AGUUCUUCAGUGGCAAGCUUUAUGUCCUGACCCAGCUAAAGCUGCCAGUUGAAGAACUGU

>Geoffroy\'s spider monkey_mir22

GGCUGAGCCGCAGUAGUUCUUCAGUGGCAAGCUUUAUGUCCUGACCCAGCUAAAGCUGCCAGUUGAAGAACUGUUGCCCUCUGCC

>Branchiostoma belcheri_mir22

CGCUCUGAGAAGCGUAGCUCUUCACUCGGUAGCUCUGUGUUUAUCUGAUCAAAGCUGCCAGAUGAAGAGCUGUGCUUCCAGGGCA

>dog_mirr22

AGUUCUUCAGUGGCAAGCUUUAUGUCCUGACCCAGCUAAAGCUGCCAGUUGAAGAACUGU

>hamster_mir22

GAGCCGCAGUAGUUCUUCAGUGGCAAGCUUUAUGUCCUGACCCAGCUAAAGCUGCCAGUUGAAGAACUGUUGCCCUCUG

>goat_mir22

CCUCACCUGGCUGAGCCGCAGUAGUUCUUCAGUGGCAAGCUUUAUGUCCUGACCCAGCUAAAGCUGCCAGUUGAAGAACUGUUGCCCUCUGCCCCUGGCUU

>zebrafish_mir22

GCUGACCUGCAGCAGUUCUUCACUGGCAAGCUUUAUGUCCUUGUGUACCAGCUAAAGCUGCCAGCUGAAGAACUGUUGUGGUUGGC

>bat_mir22

CCGGUACCUCCCACACCCUCACCUGGCUGAGCCGCAGUAGUUCUUCAGUGGCAAGCUUUAUGUCCUGACCCAGCUAAAGCUGCCAGUUGAAGAACUGUUGCCCUCUGCCGCUGGCUUCGAGGAGGAGAAGGA

>Takifugu rubripes_mir22

GCCGACCUACAGCAGUUCUUCACUGGCAAGCUUUAUGUCCUCGUGCAACAGCUAAAGCUGCCAGCUGAAGAACUGUUGUGGUUGGC

>red junglefowl_mir22

GCUCCUGGCUGCCCGGCAGCAGUUCUUCAGUGGCAAGCUUUAUGUCCUUCUCUAGUAGCUAAAGCUGCCAGUUGAAGAACUGUUGAAUGUAGCCACGUUC

>gorilla|_mir22

CCUCUCACGCCCUCACCUGGCUGAGCCGCAGUAGUUCUUCAGUGGCAAGCUUUAUGUCCUGACCCAGCUAAAGCUGCCAGUUGAAGAACUGUUGCCCUCUGCCCCUGGCUU

>Homosapiens_mir22

GGCUGAGCCGCAGUAGUUCUUCAGUGGCAAGCUUUAUGUCCUGACCCAGCUAAAGCUGCCAGUUGAAGAACUGUUGCCCUCUGCC

>Lytechinus variegatus_mir22

ACACUUCAUCUGCAUGCUGAUAUGUUAAUGUUGAGACUCAAAUAGCUAUCAGCUGCCCGGUGAAGUGUAUAGAAAC

>rhesus macaque_mir22

GGCUGAGCCGCAGUAGUUCUUCAGUGGCAAGCUUUAUGUCCUGACCCAGCUAAAGCUGCCAGUUGAAGAACUGUUGCCCUCUGCC

>platypus_mir22

CCCGUGUGCCGGCCCGGGCCUGGCUGAGUCACAGCAGUUCUUCAGUGGCAAGCUUUACGUCCUGUCCCAGCUAAAGCUGCCAGUUGAAGAACUGUUGAACUCAGCCCCUGUCUGCCACGAGG

>orangutan_mir22

GGCUGAGCCGCAGUAGUUCUUCAGUGGCAAGCUUUAUGUCCUGACCCAGCUAAAGCUGCCAGUUGAAGAACUGUUGCCCUCUGCC

>chimpanzee_mir22

GGCUGAGCCGCAGUAGUUCUUCAGUGGCAAGCUUUAUGUCCUGACCCAGCUAAAGCUGCCAGUUGAAGAACUGUUGCCCUCUGCC

>salmon_mir22

CGUUCUUCACUGGCUAGCUUUAUGUCUCACUCCCCUCUGUAAAGCUGCCAGUUGAAGAGCUGU

>frog_mir22

CUGGCCCGCUAGAAGCAGUUCUUCAGUGGCAAGCUUUAUGUUGUUCCUCUGUGCUAAAGCUGCCAGUUGAAGAACUGUUGAAAGUGGCUACU

Solution

Multiple alignment of miRNA sequences (mir-22) from different organisms by MUSCLE alignment software----

Results for job muscle-I20170327-152016-0817-93007852-oy.

Lytechinus             ----------------------------------------------------A-CACUUC
lamprey_mir22          --------------------CCCUGGCCGCCCCACUGCAGCCCUUCGCUGGCC-AGCUUU
Branchiostoma          ----------------------CGCUCUGAGAAGC-GUAGCUCUUCACUCGGU-AGCUCU
salmon_mir22           --------------------------------------CGUUCUUCACUGGCU-AGCUUU
common                 --------------AGUGAAUAUUGGCUGACCUACCGCAGUUCUUCUCUGGCA-AACUUU
Carolina               -------------------------------GCGCAGCAGUUCUUCAGCGGCAUCGCUUU
Ophiophagus_mir22      ---------------------------CUACCCGCAGCAGUUCUUCAGUGGCA-CGCUUU
zebrafish_mir22        -------------------------GCUGACCUGCAGCAGUUCUUCACUGGCA-AGCUUU
Takifugu               -------------------------GCCGACCUACAGCAGUUCUUCACUGGCA-AGCUUU
frog_mir22             ----------------------CUGGCCCGCUAGAAGCAGUUCUUCAGUGGCA-AGCUUU
red                    ------------------GCUCCUGGCUGCCCGGCAGCAGUUCUUCAGUGGCA-AGCUUU
platypus_mir22         ---CCCGUGUGCCGGCCCGGGCCUGGCUGAGUCACAGCAGUUCUUCAGUGGCA-AGCUUU
gorilla|_mir22         ------CCUCUCACGCCCUCACCUGGCUGAGCCGCAGUAGUUCUUCAGUGGCA-AGCUUU
goat_mir22             ----------------CCUCACCUGGCUGAGCCGCAGUAGUUCUUCAGUGGCA-AGCUUU
fruit                  --------------------ACCUGGCUGAGCCGCAGUAGUUCUUCAGUGGCA-AGCUUU
bat_mir22              CCGGUACCUCCCACACCCUCACCUGGCUGAGCCGCAGUAGUUCUUCAGUGGCA-AGCUUU
cattle_mir22           ------------------------GGCUGAGCCGCAGUAGUUCUUCAGUGGCA-AGCUUU
Lemur                  ------------------------GGCUGAGCCGCAGUAGUUCUUCAGUGGCA-AGCUUU
Pan                    ------------------------GGCUGAGCCGCAGUAGUUCUUCAGUGGCA-AGCUUU
wild                   ----------------------------GAGCCGCAGUAGUUCUUCAGUGGCA-AGCUUU
Tupaia_mir22           --------------------------------------AGUUCUUCAGUGGCA-AGCUUU
Geoffroy\'s             ------------------------GGCUGAGCCGCAGUAGUUCUUCAGUGGCA-AGCUUU
dog_mirr22             --------------------------------------AGUUCUUCAGUGGCA-AGCUUU
hamster_mir22          ----------------------------GAGCCGCAGUAGUUCUUCAGUGGCA-AGCUUU
Homosapiens_mir22      ------------------------GGCUGAGCCGCAGUAGUUCUUCAGUGGCA-AGCUUU
rhesus                 ------------------------GGCUGAGCCGCAGUAGUUCUUCAGUGGCA-AGCUUU
orangutan_mir22        ------------------------GGCUGAGCCGCAGUAGUUCUUCAGUGGCA-AGCUUU
chimpanzee_mir22       ------------------------GGCUGAGCCGCAGUAGUUCUUCAGUGGCA-AGCUUU
                                                                               **

Lytechinus             AUCUGCAUGCUGAUAUGUUAAUGUUGA-GACUCAAAUAGCUAU---CAGCUGCCCGGUGA
lamprey_mir22          AGUUCCGGCCGAGGCGAGUAAAGCUGC-CAGUUGAAGAGCUAUAGUGGGCGGCCACGC--
Branchiostoma          GUGU--UUAUCUG---AUCAAAGCUGC-CAGAUGAAGAGCUGUGCUUCCAGGGCA-----
salmon_mir22           AUGUCUCACUCCCCUCUGUAAAGCUGC-CAGUUGAAGAGCUGU-----------------
common                 AUGACCCUGUCCUGACGCUAAAGCUGC-CAGCUGAAGAACUGUUGUGGUCAGCUCU----
Carolina               ACGUCCCUUUUAAGAAGCUAAAGCUGCGCAGUUGAAGAACUGUUGGCC------------
Ophiophagus_mir22      ACGUCCC-CUCCAGCAACUAAAGCUGC-CAGUUGAAGAACUGUUGGCCGUAGC-------
zebrafish_mir22        AUGUCCUUGUGUACCAGCUAAAGCUGC-CAGCUGAAGAACUGUUGUGGUUGGC-------
Takifugu               AUGUCCUCGUGCAACAGCUAAAGCUGC-CAGCUGAAGAACUGUUGUGGUUGGC-------
frog_mir22             AUGUUGUUCCUCUGU-GCUAAAGCUGC-CAGUUGAAGAACUGUUGAAAGUGGCUACU---
red                    AUGUCCUUCUCUAGUAGCUAAAGCUGC-CAGUUGAAGAACUGUUGAAUGUAGCCACGUUC
platypus_mir22         ACGUCCUGUCCCA---GCUAAAGCUGC-CAGUUGAAGAACUGUUGAACUCAGCCCCUGUC
gorilla|_mir22         AUGUCCUGACCCA---GCUAAAGCUGC-CAGUUGAAGAACUGUUGCCCUCUGCCCCUGGC
goat_mir22             AUGUCCUGACCCA---GCUAAAGCUGC-CAGUUGAAGAACUGUUGCCCUCUGCCCCUGGC
fruit                  AUGUCCUGACCCA---GCUAAAGCUGC-CAGUUGAAGAACUGUUGCCCUCUGCCCCUGGC
bat_mir22              AUGUCCUGACCCA---GCUAAAGCUGC-CAGUUGAAGAACUGUUGCCCUCUGCCGCUGGC
cattle_mir22           AUGUCCUGACCCA---GCUAAAGCUGC-CAGUUGAAGAACUGUUGCCCUCUGCC------
Lemur                  AUGUCCUGACCCA---GCUAAAGCUGC-CAGUUGAAGAACUGUUGCCCUCUGCC------
Pan                    AUGUCCUGACCCA---GCUAAAGCUGC-CAGUUGAAGAACUGUUGCCCUCUGCC------
wild                   AUGUCCUGACCCA---GCUAAAGCUGC-CAGUUGAAGAACUGUUGCCCUCUGC-------
Tupaia_mir22           AUGUCCUGACCCA---GCUAAAGCUGC-CAGUUGAAGAACUGU-----------------
Geoffroy\'s             AUGUCCUGACCCA---GCUAAAGCUGC-CAGUUGAAGAACUGUUGCCCUCUGCC------
dog_mirr22             AUGUCCUGACCCA---GCUAAAGCUGC-CAGUUGAAGAACUGU-----------------
hamster_mir22          AUGUCCUGACCCA---GCUAAAGCUGC-CAGUUGAAGAACUGUUGCCCUCUG--------
Homosapiens_mir22      AUGUCCUGACCCA---GCUAAAGCUGC-CAGUUGAAGAACUGUUGCCCUCUGCC------
rhesus                 AUGUCCUGACCCA---GCUAAAGCUGC-CAGUUGAAGAACUGUUGCCCUCUGCC------
orangutan_mir22        AUGUCCUGACCCA---GCUAAAGCUGC-CAGUUGAAGAACUGUUGCCCUCUGCC------
chimpanzee_mir22       AUGUCCUGACCCA---GCUAAAGCUGC-CAGUUGAAGAACUGUUGCCCUCUGCC------
                                          ** * **   *    ** * ** *                

Lytechinus             AGUGUAUAGAAAC----
lamprey_mir22          -----------------
Branchiostoma          -----------------
salmon_mir22           -----------------
common                 -----------------
Carolina               -----------------
Ophiophagus_mir22      -----------------
zebrafish_mir22        -----------------
Takifugu               -----------------
frog_mir22             -----------------
red                    -----------------
platypus_mir22         UGCCACGAGG-------
gorilla|_mir22         UU---------------
goat_mir22             UU---------------
fruit                  -----------------
bat_mir22              UUCGAGGAGGAGAAGGA
cattle_mir22           -----------------
Lemur                  -----------------
Pan                    -----------------
wild                   -----------------
Tupaia_mir22           -----------------
Geoffroy\'s             -----------------
dog_mirr22             -----------------
hamster_mir22          -----------------
Homosapiens_mir22      -----------------
rhesus                 -----------------
orangutan_mir22        -----------------
chimpanzee_mir22       -----------------

alignment by CLUSTAL OMEGA--

Results for job clustalo-I20170327-152204-0590-68491529-pg